Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0030 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265833 bp
Thymine Count
1277245 bp
Guanine Count
1306867 bp
Cytosine Count
1287070 bp
Genome Length
5149765 bp
Protein-coding Genes
4734 genes
Non-Coding Genes
371 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pig-l family deacetylase | C9Y83_17335 | Not Available | Negative | 3475197 - 3475868 | 25041.2 |
| taurine abc transporter substrate-binding protein | C9Y83_17340 | Not Available | Positive | 3476484 - 3477446 | 34285.9 |
| taurine abc transporter atp-binding subunit | C9Y83_17345 | Not Available | Positive | 3477459 - 3478226 | 28283.5 |
| taurine abc transporter permease tauc | C9Y83_17350 | Not Available | Positive | 3478223 - 3479050 | 29569.5 |
| taurine dioxygenase | C9Y83_17355 | Not Available | Positive | 3479047 - 3479898 | 32411.3 |
| porphobilinogen synthase | C9Y83_17360 | Not Available | Negative | 3480004 - 3480978 | 35626.8 |
| autotransporter outer membrane beta-barrel domain-containing protein | C9Y83_17365 | Not Available | Positive | 3481503 - 3484478 | 106497.0 |
| hydrogen peroxide resistance inhibitor ipra | C9Y83_17370 | Not Available | Positive | 3484569 - 3485192 | 23957.1 |
| d-alanyl-d-alanine- carboxypeptidase/endopeptidase amph | C9Y83_17375 | Not Available | Negative | 3485193 - 3486350 | 41851.5 |
| type iv secretion protein rhs | C9Y83_17385 | Not Available | Negative | 3487758 - 3487835 | 2554.02 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





