Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0030 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265833 bp
Thymine Count
1277245 bp
Guanine Count
1306867 bp
Cytosine Count
1287070 bp
Genome Length
5149765 bp
Protein-coding Genes
4734 genes
Non-Coding Genes
371 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secretion protein esph | C9Y83_16330 | Not Available | Positive | 3272812 - 3273327 | 19508.2 |
| tir chaperone family protein | C9Y83_16335 | Not Available | Negative | 3273546 - 3273905 | 13809.5 |
| t3ss effector protein map | C9Y83_16340 | Not Available | Positive | 3274156 - 3274767 | 22601.1 |
| type iii secretion system lee translocated intimin receptor tir | C9Y83_16345 | Not Available | Positive | 3275214 - 3276830 | 55485.1 |
| type iii secretion system lee chaperone cest | C9Y83_16350 | Not Available | Positive | 3276963 - 3277433 | 17721.9 |
| intimin type epsilon | C9Y83_16355 | Not Available | Positive | 3277494 - 3280340 | 103316.0 |
| type iii secretion system lee inner membrane ring protein escd | C9Y83_16360 | Not Available | Negative | 3280614 - 3281834 | 45154.7 |
| tyea family type iii secretion system gatekeeper subunit | C9Y83_16365 | Not Available | Positive | 3281977 - 3283032 | 39947.9 |
| secretion protein espa | C9Y83_16370 | Not Available | Positive | 3283090 - 3283668 | 20533.2 |
| secretion protein espd | C9Y83_16375 | Not Available | Positive | 3283681 - 3284823 | 39578.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





