Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0030 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265833 bp
Thymine Count
1277245 bp
Guanine Count
1306867 bp
Cytosine Count
1287070 bp
Genome Length
5149765 bp
Protein-coding Genes
4734 genes
Non-Coding Genes
371 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase | C9Y83_15660 | Not Available | Negative | 3160120 - 3160641 | 19483.5 |
| ribosome-associated protein ybcj | C9Y83_15665 | Not Available | Negative | 3160749 - 3160961 | 7389.95 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | C9Y83_15670 | Not Available | Negative | 3160963 - 3161829 | 31045.6 |
| type 1 fimbrial protein subunit fima | C9Y83_15675 | Not Available | Positive | 3162310 - 3162852 | 18503.5 |
| molecular chaperone fimc | C9Y83_15680 | Not Available | Positive | 3163072 - 3163764 | 25432.1 |
| type 1 fimbrin d-mannose specific adhesin fimh | C9Y83_15690 | Not Available | Positive | 3166416 - 3167423 | 36585.0 |
| fimbriae assembly protein | C9Y83_15695 | Not Available | Positive | 3167434 - 3167949 | 18149.6 |
| fimbriae biosynthesis transcriptional regulator fimz | C9Y83_15700 | Not Available | Negative | 3167952 - 3168584 | 23664.9 |
| Trna-arg | Not Available | Not Available | Positive | 3168827 - 3168903 | Not Available |
| hypothetical protein | C9Y83_15870 | Not Available | Positive | 3187275 - 3187568 | 11257.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





