Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0030 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265833 bp
Thymine Count
1277245 bp
Guanine Count
1306867 bp
Cytosine Count
1287070 bp
Genome Length
5149765 bp
Protein-coding Genes
4734 genes
Non-Coding Genes
371 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel import atp-binding protein nike | C9Y83_15190 | Not Available | Negative | 3063366 - 3064172 | 29700.5 |
| nickel import atp-binding protein nikd | C9Y83_15195 | Not Available | Negative | 3064169 - 3064933 | 26835.1 |
| nickel abc transporter permease subunit nikc | C9Y83_15200 | Not Available | Negative | 3064933 - 3065766 | 30363.8 |
| nickel abc transporter permease subunit nikb | C9Y83_15205 | Not Available | Negative | 3065763 - 3066707 | 35250.3 |
| nickel abc transporter, nickel/metallophore periplasmic binding protein | C9Y83_15210 | Not Available | Negative | 3066707 - 3068281 | 58791.3 |
| 4'-phosphopantetheinyl transferase | C9Y83_15215 | Not Available | Negative | 3068392 - 3068979 | 21738.9 |
| ai-2e family transporter | C9Y83_15220 | Not Available | Negative | 3069034 - 3070083 | 38552.8 |
| mfs transporter | C9Y83_15225 | Not Available | Positive | 3070215 - 3071432 | 42115.2 |
| protein dcrb | C9Y83_15230 | Not Available | Negative | 3071436 - 3071993 | 19788.7 |
| 7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter | C9Y83_15235 | Not Available | Negative | 3072066 - 3072731 | 25304.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





