Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0030 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265833 bp
Thymine Count
1277245 bp
Guanine Count
1306867 bp
Cytosine Count
1287070 bp
Genome Length
5149765 bp
Protein-coding Genes
4734 genes
Non-Coding Genes
371 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux rnd transporter permease subunit | C9Y83_14975 | Not Available | Negative | 3018674 - 3021787 | 111502.0 |
| multidrug transporter subunit mdte | C9Y83_14980 | Not Available | Negative | 3021812 - 3022969 | 41227.0 |
| hypothetical protein | C9Y83_14985 | Not Available | Positive | 3023029 - 3023307 | 9789.79 |
| acid resistance transcriptional activator gade | C9Y83_14990 | Not Available | Negative | 3023308 - 3023835 | 20600.6 |
| protein hded | C9Y83_14995 | Not Available | Negative | 3024634 - 3025206 | 20904.6 |
| acid stress chaperone hdea | C9Y83_15000 | Not Available | Positive | 3025461 - 3025793 | 11858.2 |
| acid stress chaperone hdeb | C9Y83_15005 | Not Available | Positive | 3025909 - 3026235 | 12043.5 |
| mgtc/sapb family protein | C9Y83_15010 | Not Available | Positive | 3026299 - 3026946 | 23214.9 |
| helix-turn-helix transcriptional regulator | C9Y83_15015 | Not Available | Negative | 3026988 - 3027518 | 20409.5 |
| outer membrane lipoprotein slp | C9Y83_15020 | Not Available | Negative | 3027674 - 3028240 | 20949.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





