Escherichia coli strain FWSEC0030

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0030 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism. It can be found in pairs or singles and possesses flagella, enabling mobility. This strain thrives at an optimal temperature of 37°C, classifying it as mesophilic. It has a single replicon and two membranes, consistent with its classification as a member of the Enterobacteriaceae family. FWSEC0030 is primarily host-associated, with a diverse range of hosts including Homo sapiens, various mammals such as Bos taurus (cattle) and Sus scrofa (pigs), as well as birds and some invertebrates like Apis mellifera (honeybees) and Solanum lycopersicum (tomatoes). This broad host range underscores its ecological versatility and potential for interaction across different ecosystems. The strain is associated with a variety of health effects, particularly in humans, where it is known to cause urinary tract infections (UTIs), gastrointestinal infections, and more severe conditions such as septicemia and hemolytic uremic syndrome (HUS). These pathogenic effects highlight its significance in both clinical and public health contexts. Overall, E. coli strain FWSEC0030 plays a notable role in the microbiota of various hosts, while also posing health risks that necessitate vigilant monitoring and management in both agricultural and healthcare settings. Its ability to adapt to diverse environments and hosts underscores the importance of understanding its biology and pathogenic potential.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0030

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0030
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0030 plasmid unnamed6

Gene Summary

Adenine Count

1265833 bp

Thymine Count

1277245 bp

Guanine Count

1306867 bp

Cytosine Count

1287070 bp

Genome Length

5149765 bp

Protein-coding Genes

4734 genes

Non-Coding Genes

371 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flagellar type iii secretion system protein flirC9Y83_14725Not AvailableNegative2980298 - 298108328539.4
flagellar biosynthetic protein fliqC9Y83_14730Not AvailableNegative2981092 - 29813619632.54
flagellar biosynthetic protein flipC9Y83_14735Not AvailableNegative2981371 - 298210826930.1
flagellar type iii secretion system protein flioC9Y83_14740Not AvailableNegative2982108 - 298247312694.7
flagellar motor switch protein flinC9Y83_14745Not AvailableNegative2982476 - 298288914811.7
flagellar motor switch protein flimC9Y83_14750Not AvailableNegative2982886 - 298389037865.5
flagellar basal body-associated protein flilC9Y83_14755Not AvailableNegative2983895 - 298435917207.8
flagellar hook length control protein flikC9Y83_14760Not AvailableNegative2984464 - 298559139329.1
flagella biosynthesis chaperone flijC9Y83_14765Not AvailableNegative2985588 - 298603117325.6
flagellum-specific atp synthase fliiC9Y83_14770Not AvailableNegative2986050 - 298742349318.6

Displaying genes 3001 – 3010 of 5109 in total

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total