Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0030 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265833 bp
Thymine Count
1277245 bp
Guanine Count
1306867 bp
Cytosine Count
1287070 bp
Genome Length
5149765 bp
Protein-coding Genes
4734 genes
Non-Coding Genes
371 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| very short patch repair endonuclease | C9Y83_14675 | Not Available | Positive | 2973058 - 2973528 | 18002.6 |
| eama family transporter | C9Y83_14680 | Not Available | Negative | 2973517 - 2974437 | 32214.0 |
| duf808 domain-containing protein | C9Y83_14685 | Not Available | Positive | 2974610 - 2975527 | 32134.7 |
| duf2158 domain-containing protein | C9Y83_14690 | Not Available | Positive | 2975606 - 2975788 | 6678.85 |
| cellulose biosynthesis regulator yedq | C9Y83_14695 | Not Available | Positive | 2975959 - 2977653 | 64289.5 |
| mannosyl-3-phosphoglycerate phosphatase-related protein | C9Y83_14700 | Not Available | Negative | 2977650 - 2978465 | 30457.9 |
| stress-induced protein yodd | C9Y83_14705 | Not Available | Negative | 2978763 - 2978990 | 8579.66 |
| hypothetical protein | C9Y83_14710 | Not Available | Positive | 2978978 - 2979166 | 7014.32 |
| protein dsrb | C9Y83_14715 | Not Available | Positive | 2979099 - 2979341 | 9071.8 |
| transcriptional regulator rcsa | C9Y83_14720 | Not Available | Negative | 2979385 - 2980008 | 23522.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





