Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0030 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265833 bp
Thymine Count
1277245 bp
Guanine Count
1306867 bp
Cytosine Count
1287070 bp
Genome Length
5149765 bp
Protein-coding Genes
4734 genes
Non-Coding Genes
371 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylacetate-coa oxygenase subunit paaj | C9Y83_14390 | Not Available | Positive | 2919047 - 2919544 | 18347.1 |
| phenylacetate-coa oxygenase/reductase subunit paak | C9Y83_14395 | Not Available | Positive | 2919552 - 2920622 | 39346.3 |
| 2,3-dehydroadipyl-coa hydratase | C9Y83_14400 | Not Available | Positive | 2920619 - 2921386 | 27166.8 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase | C9Y83_14405 | Not Available | Positive | 2921386 - 2922174 | 28385.3 |
| 3-hydroxyadipyl-coa dehydrogenase | C9Y83_14410 | Not Available | Positive | 2922176 - 2923603 | 51707.6 |
| acyl-coa thioesterase | C9Y83_14415 | Not Available | Positive | 2923593 - 2924015 | 14851.6 |
| beta-ketoadipyl coa thiolase | C9Y83_14420 | Not Available | Positive | 2924015 - 2925220 | 42279.2 |
| phenylacetate--coa ligase | C9Y83_14425 | Not Available | Positive | 2925247 - 2926560 | 48955.8 |
| phenylacetic acid degradation operon negative regulatory protein paax | C9Y83_14430 | Not Available | Positive | 2926661 - 2927611 | 35327.7 |
| phenylacetic acid degradation protein paay | C9Y83_14435 | Not Available | Positive | 2927593 - 2928183 | 21444.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





