Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0030 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265833 bp
Thymine Count
1277245 bp
Guanine Count
1306867 bp
Cytosine Count
1287070 bp
Genome Length
5149765 bp
Protein-coding Genes
4734 genes
Non-Coding Genes
371 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosomal replication initiator protein dnaa | C9Y83_13875 | Not Available | Positive | 2807352 - 2808755 | 52553.7 |
| dna polymerase iii subunit beta | C9Y83_13880 | Not Available | Positive | 2808760 - 2809860 | 40589.1 |
| dna replication/repair protein recf | C9Y83_13885 | Not Available | Positive | 2809860 - 2810933 | 40515.4 |
| dna gyrase subunit b | C9Y83_13890 | Not Available | Positive | 2810962 - 2813376 | 89955.0 |
| duf937 domain-containing protein | C9Y83_13895 | Not Available | Positive | 2813607 - 2814014 | 14145.0 |
| sugar phosphatase yida | C9Y83_13900 | Not Available | Positive | 2814129 - 2814941 | 29722.8 |
| hypothetical protein | C9Y83_13905 | Not Available | Negative | 2814987 - 2815643 | 24170.9 |
| transcriptional regulator | C9Y83_13910 | Not Available | Positive | 2815921 - 2816610 | 26081.1 |
| 2-dehydro-3-deoxygalactonokinase | C9Y83_13915 | Not Available | Positive | 2816607 - 2817485 | 31384.3 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | C9Y83_13920 | Not Available | Positive | 2817469 - 2818086 | 21418.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





