Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0030 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265833 bp
Thymine Count
1277245 bp
Guanine Count
1306867 bp
Cytosine Count
1287070 bp
Genome Length
5149765 bp
Protein-coding Genes
4734 genes
Non-Coding Genes
371 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | C9Y83_13430 | Not Available | Positive | 2724506 - 2725588 | 40060.9 |
| monomeric porin ompg | C9Y83_13435 | Not Available | Positive | 2725633 - 2726538 | 34915.0 |
| laci family transcriptional regulator | C9Y83_13440 | Not Available | Negative | 2726649 - 2727647 | 36151.2 |
| ycjx family protein | C9Y83_13445 | Not Available | Positive | 2727802 - 2729199 | 52625.6 |
| tigr01620 family protein | C9Y83_13450 | Not Available | Positive | 2729196 - 2730257 | 39363.5 |
| transcriptional regulator tyrr | C9Y83_13455 | Not Available | Positive | 2730405 - 2731946 | 57673.6 |
| 2-cys peroxiredoxin | C9Y83_13460 | Not Available | Negative | 2731990 - 2732496 | 17836.3 |
| l-ala-d/l-glu epimerase | C9Y83_13465 | Not Available | Positive | 2732615 - 2733580 | 34637.9 |
| murein tripeptide amidase mpaa | C9Y83_13470 | Not Available | Negative | 2733555 - 2734283 | 26572.4 |
| sdr family oxidoreductase | C9Y83_13475 | Not Available | Negative | 2734592 - 2735230 | 23333.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





