Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0030 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265833 bp
Thymine Count
1277245 bp
Guanine Count
1306867 bp
Cytosine Count
1287070 bp
Genome Length
5149765 bp
Protein-coding Genes
4734 genes
Non-Coding Genes
371 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | C9Y83_12120 | Not Available | Negative | 2464378 - 2465586 | 41841.0 |
| dna-binding transcriptional regulator | C9Y83_12125 | Not Available | Positive | 2465670 - 2466206 | 20308.6 |
| transporter | C9Y83_12130 | Not Available | Negative | 2466381 - 2468066 | 60355.1 |
| hypothetical protein | C9Y83_12135 | Not Available | Positive | 2468336 - 2468713 | 14204.0 |
| grxa family glutaredoxin | C9Y83_12140 | Not Available | Negative | 2468743 - 2469000 | 9695.39 |
| duf1418 family protein | C9Y83_12145 | Not Available | Positive | 2469160 - 2469447 | 10565.4 |
| nitroreductase nfsa | C9Y83_12150 | Not Available | Positive | 2469431 - 2470153 | 26762.1 |
| 30s ribosomal protein s6--l-glutamate ligase | C9Y83_12155 | Not Available | Positive | 2470214 - 2471116 | 32438.5 |
| ybjn domain-containing protein | C9Y83_12160 | Not Available | Positive | 2471204 - 2471680 | 17667.1 |
| spermidine/putrescine abc transporter substrate-binding protein potf | C9Y83_12165 | Not Available | Positive | 2472032 - 2473144 | 40832.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





