Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0030 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265833 bp
Thymine Count
1277245 bp
Guanine Count
1306867 bp
Cytosine Count
1287070 bp
Genome Length
5149765 bp
Protein-coding Genes
4734 genes
Non-Coding Genes
371 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s12 methylthiotransferase rimo | C9Y83_12070 | Not Available | Negative | 2454957 - 2456282 | 49584.6 |
| biofilm regulator bssr | C9Y83_12075 | Not Available | Positive | 2456495 - 2456878 | 14536.6 |
| pqq-dependent sugar dehydrogenase | C9Y83_12080 | Not Available | Positive | 2456989 - 2458104 | 41070.8 |
| glutathione s-transferase | C9Y83_12085 | Not Available | Negative | 2458101 - 2458727 | 23714.4 |
| d-alanyl-d-alanine carboxypeptidase | C9Y83_12090 | Not Available | Positive | 2458974 - 2460176 | 43643.4 |
| dna-binding transcriptional repressor deor | C9Y83_12095 | Not Available | Negative | 2460223 - 2460981 | 28576.6 |
| undecaprenyl-diphosphate phosphatase | C9Y83_12100 | Not Available | Negative | 2461039 - 2461635 | 22419.9 |
| multidrug efflux mfs transporter mdfa | C9Y83_12105 | Not Available | Positive | 2461920 - 2463152 | 44291.7 |
| hypothetical protein | C9Y83_12110 | Not Available | Negative | 2463193 - 2463477 | 10005.2 |
| had family hydrolase | C9Y83_12115 | Not Available | Negative | 2463563 - 2464378 | 30265.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





