Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0030 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265833 bp
Thymine Count
1277245 bp
Guanine Count
1306867 bp
Cytosine Count
1287070 bp
Genome Length
5149765 bp
Protein-coding Genes
4734 genes
Non-Coding Genes
371 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| log family protein ygdh | C9Y83_11810 | Not Available | Negative | 2390841 - 2392205 | 50975.0 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | C9Y83_11815 | Not Available | Negative | 2392317 - 2393165 | 32559.2 |
| protein syd | C9Y83_11820 | Not Available | Positive | 2393233 - 2393778 | 20709.6 |
| yqcc family protein | C9Y83_11825 | Not Available | Positive | 2394400 - 2394729 | 12787.2 |
| trna pseudouridine(65) synthase truc | C9Y83_11830 | Not Available | Positive | 2394729 - 2395511 | 29657.4 |
| flavodoxin | C9Y83_11835 | Not Available | Positive | 2395529 - 2395978 | 16275.1 |
| mfs transporter | C9Y83_11840 | Not Available | Positive | 2396413 - 2397765 | 49145.0 |
| glucarate dehydratase | C9Y83_11845 | Not Available | Positive | 2397767 - 2399107 | 48982.6 |
| glucarate dehydratase | C9Y83_11850 | Not Available | Positive | 2399128 - 2400468 | 49144.9 |
| signal transduction histidine kinase | C9Y83_11855 | Not Available | Negative | 2400700 - 2403456 | 102460.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





