Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0030 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265833 bp
Thymine Count
1277245 bp
Guanine Count
1306867 bp
Cytosine Count
1287070 bp
Genome Length
5149765 bp
Protein-coding Genes
4734 genes
Non-Coding Genes
371 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine/serine transporter tdcc | C9Y83_11660 | Not Available | Negative | 2359827 - 2361158 | 48895.8 |
| bifunctional threonine ammonia-lyase/l-serine ammonia-lyase tdcb | C9Y83_11665 | Not Available | Negative | 2361180 - 2362169 | 35246.6 |
| transcriptional regulator | C9Y83_11670 | Not Available | Negative | 2362268 - 2363206 | 34540.9 |
| dna-binding transcriptional activator tdcr | C9Y83_11675 | Not Available | Positive | 2363395 - 2363739 | 13540.3 |
| hypothetical protein | C9Y83_11680 | Not Available | Positive | 2363995 - 2364534 | 20524.5 |
| yhac family protein | C9Y83_11685 | Not Available | Positive | 2364556 - 2365743 | 45259.5 |
| ompa family protein | C9Y83_11690 | Not Available | Negative | 2365941 - 2366452 | 18918.5 |
| dotu family type iv/vi secretion system protein | C9Y83_11695 | Not Available | Negative | 2366465 - 2367130 | 25281.7 |
| type vi secretion system baseplate subunit tssk | C9Y83_11700 | Not Available | Negative | 2367127 - 2368464 | 49603.7 |
| type vi secretion system contractile sheath large subunit | C9Y83_11705 | Not Available | Negative | 2368482 - 2370020 | 58006.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





