Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0030 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265833 bp
Thymine Count
1277245 bp
Guanine Count
1306867 bp
Cytosine Count
1287070 bp
Genome Length
5149765 bp
Protein-coding Genes
4734 genes
Non-Coding Genes
371 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2492 family protein | C9Y83_11210 | Not Available | Negative | 2275131 - 2275370 | 8644.22 |
| tyrosine transporter tyrp | C9Y83_11215 | Not Available | Positive | 2275561 - 2276772 | 42795.7 |
| sugar phosphate isomerase/epimerase | C9Y83_11365 | Not Available | Negative | 2295920 - 2296032 | 3875.78 |
| hypothetical protein | C9Y83_11370 | Not Available | Positive | 2296046 - 2296234 | 6956.64 |
| dead/deah box helicase | C9Y83_11375 | Not Available | Negative | 2296252 - 2298612 | 87985.4 |
| inovirus gp2 family protein | C9Y83_11380 | Not Available | Negative | 2298767 - 2299330 | 22351.9 |
| duf3987 domain-containing protein | C9Y83_11385 | Not Available | Negative | 2300343 - 2301776 | 54341.3 |
| alpa family phage regulatory protein | C9Y83_11390 | Not Available | Negative | 2301872 - 2302099 | 8919.75 |
| hypothetical protein | C9Y83_11395 | Not Available | Positive | 2302829 - 2304442 | 62521.4 |
| hypothetical protein | C9Y83_11400 | Not Available | Negative | 2304324 - 2304605 | 10762.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





