Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0030 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265833 bp
Thymine Count
1277245 bp
Guanine Count
1306867 bp
Cytosine Count
1287070 bp
Genome Length
5149765 bp
Protein-coding Genes
4734 genes
Non-Coding Genes
371 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdar family transcriptional regulator | C9Y83_10350 | Not Available | Positive | 2114407 - 2115564 | 43732.1 |
| duf3461 family protein | C9Y83_10355 | Not Available | Negative | 2115653 - 2116039 | 15097.0 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | C9Y83_10360 | Not Available | Negative | 2116351 - 2117175 | 29893.8 |
| bifunctional uridylyltransferase/uridylyl-removing protein glnd | C9Y83_10365 | Not Available | Negative | 2117206 - 2119878 | 102501.0 |
| type i methionyl aminopeptidase | C9Y83_10370 | Not Available | Negative | 2119940 - 2120734 | 29332.5 |
| 30s ribosomal protein s2 | C9Y83_10375 | Not Available | Positive | 2121102 - 2121827 | 26759.2 |
| elongation factor ts | C9Y83_10380 | Not Available | Positive | 2122085 - 2122936 | 30424.7 |
| ump kinase | C9Y83_10385 | Not Available | Positive | 2123083 - 2123808 | 25971.9 |
| ribosome recycling factor | C9Y83_10390 | Not Available | Positive | 2124100 - 2124657 | 20639.7 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | C9Y83_10395 | Not Available | Positive | 2124749 - 2125945 | 43390.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





