Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0030 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265833 bp
Thymine Count
1277245 bp
Guanine Count
1306867 bp
Cytosine Count
1287070 bp
Genome Length
5149765 bp
Protein-coding Genes
4734 genes
Non-Coding Genes
371 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe(3+)-hydroxamate abc transporter permease fhub | C9Y83_10300 | Not Available | Positive | 2103529 - 2105511 | 70455.7 |
| glutamate-1-semialdehyde 2,1-aminomutase | C9Y83_10305 | Not Available | Negative | 2105546 - 2106826 | 45358.7 |
| h(+)/cl(-) exchange transporter clca | C9Y83_10310 | Not Available | Positive | 2107051 - 2108472 | 50351.9 |
| hypothetical protein | C9Y83_10315 | Not Available | Positive | 2108496 - 2108561 | 2329.94 |
| iron-sulfur cluster insertion protein erpa | C9Y83_10320 | Not Available | Positive | 2108554 - 2108898 | 12101.2 |
| tric cation channel family protein | C9Y83_10325 | Not Available | Negative | 2108945 - 2109568 | 22129.1 |
| vitamin b12 abc transporter substrate-binding protein btuf | C9Y83_10330 | Not Available | Negative | 2109606 - 2110406 | 29368.4 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | C9Y83_10335 | Not Available | Negative | 2110399 - 2111097 | 24302.3 |
| deoxyguanosinetriphosphate triphosphohydrolase | C9Y83_10340 | Not Available | Positive | 2111181 - 2112698 | 59384.2 |
| serine endoprotease degq | C9Y83_10345 | Not Available | Positive | 2112828 - 2114252 | 49343.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





