Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0030 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265833 bp
Thymine Count
1277245 bp
Guanine Count
1306867 bp
Cytosine Count
1287070 bp
Genome Length
5149765 bp
Protein-coding Genes
4734 genes
Non-Coding Genes
371 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component-system connector protein ycgz | C9Y83_10065 | Not Available | Negative | 2062490 - 2062726 | 8729.47 |
| blue light- and temperature-regulated antirepressor bluf | C9Y83_10070 | Not Available | Positive | 2063040 - 2064251 | 45297.6 |
| helix-turn-helix-type transcriptional regulator | C9Y83_10075 | Not Available | Positive | 2064456 - 2065187 | 28266.2 |
| duf1398 domain-containing protein | C9Y83_10080 | Not Available | Positive | 2065408 - 2065812 | 15770.0 |
| hypothetical protein | C9Y83_10085 | Not Available | Positive | 2065865 - 2065975 | 4216.47 |
| anti-adapter protein iram | C9Y83_10090 | Not Available | Positive | 2066508 - 2066831 | 12180.2 |
| nadp-dependent isocitrate dehydrogenase | C9Y83_10095 | Not Available | Negative | 2066934 - 2068184 | 45772.4 |
| 23s rrna pseudouridine synthase e | C9Y83_10100 | Not Available | Positive | 2068356 - 2069009 | 24881.8 |
| nudix hydrolase | C9Y83_10105 | Not Available | Positive | 2069019 - 2069480 | 17433.8 |
| trna 2-thiouridine(34) synthase mnma | C9Y83_10110 | Not Available | Positive | 2069534 - 2070640 | 40961.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





