Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0030 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265833 bp
Thymine Count
1277245 bp
Guanine Count
1306867 bp
Cytosine Count
1287070 bp
Genome Length
5149765 bp
Protein-coding Genes
4734 genes
Non-Coding Genes
371 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radical sam family heme chaperone hemw | C9Y83_09715 | Not Available | Positive | 1993072 - 1994208 | 42561.7 |
| trap transporter substrate-binding protein | C9Y83_09720 | Not Available | Positive | 1994520 - 1995506 | 36560.9 |
| trap transporter small permease | C9Y83_09725 | Not Available | Positive | 1995551 - 1996054 | 18360.3 |
| trap transporter large permease subunit | C9Y83_09730 | Not Available | Positive | 1996054 - 1997355 | 45787.5 |
| duf1202 family protein | C9Y83_09735 | Not Available | Negative | 1997411 - 1998418 | 38475.4 |
| l-asparaginase 2 | C9Y83_09740 | Not Available | Negative | 1998535 - 1999581 | 36851.7 |
| duf2884 family protein | C9Y83_09745 | Not Available | Negative | 1999757 - 2000476 | 26430.8 |
| duf469 domain-containing protein | C9Y83_09750 | Not Available | Negative | 2000660 - 2000986 | 12881.2 |
| trna (guanosine(46)-n7)-methyltransferase trmb | C9Y83_09755 | Not Available | Negative | 2000986 - 2001705 | 27308.9 |
| adenine dna glycosylase | C9Y83_09760 | Not Available | Positive | 2001866 - 2002918 | 39160.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





