Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0030 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265833 bp
Thymine Count
1277245 bp
Guanine Count
1306867 bp
Cytosine Count
1287070 bp
Genome Length
5149765 bp
Protein-coding Genes
4734 genes
Non-Coding Genes
371 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease-1 | C9Y83_09665 | Not Available | Positive | 1986147 - 1986854 | 26710.5 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | C9Y83_09670 | Not Available | Positive | 1986934 - 1987665 | 26979.7 |
| glutathione synthetase | C9Y83_09675 | Not Available | Positive | 1987678 - 1988628 | 35563.0 |
| yqge/algh family protein | C9Y83_09680 | Not Available | Positive | 1988737 - 1989300 | 20687.1 |
| holliday junction resolvase ruvx | C9Y83_09685 | Not Available | Positive | 1989300 - 1989716 | 15187.2 |
| type iv pilus twitching motility protein pilt | C9Y83_09690 | Not Available | Negative | 1989905 - 1990885 | 35948.3 |
| yggs family pyridoxal phosphate-dependent enzyme | C9Y83_09695 | Not Available | Positive | 1990903 - 1991607 | 25788.9 |
| yggt family protein | C9Y83_09700 | Not Available | Positive | 1991625 - 1992191 | 21168.5 |
| yggu family protein | C9Y83_09705 | Not Available | Positive | 1992188 - 1992478 | 10385.8 |
| xtp/ditp diphosphatase | C9Y83_09710 | Not Available | Positive | 1992486 - 1993079 | 20951.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





