Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0030 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265833 bp
Thymine Count
1277245 bp
Guanine Count
1306867 bp
Cytosine Count
1287070 bp
Genome Length
5149765 bp
Protein-coding Genes
4734 genes
Non-Coding Genes
371 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metalloprotease | C9Y83_09615 | Not Available | Positive | 1976109 - 1976867 | 26844.9 |
| duf1266 domain-containing protein | C9Y83_09620 | Not Available | Negative | 1976953 - 1978515 | 59266.1 |
| agmatinase | C9Y83_09625 | Not Available | Negative | 1978666 - 1979586 | 33558.9 |
| biosynthetic arginine decarboxylase | C9Y83_09630 | Not Available | Negative | 1979723 - 1981699 | 73890.6 |
| virulence promoting factor | C9Y83_09635 | Not Available | Negative | 1981708 - 1981839 | 4859.08 |
| hypothetical protein | C9Y83_09640 | Not Available | Positive | 1981975 - 1982190 | 8114.98 |
| duf2684 family protein | C9Y83_09645 | Not Available | Negative | 1982187 - 1982438 | 9592.86 |
| s-adenosylmethionine synthase | C9Y83_09650 | Not Available | Positive | 1982494 - 1983648 | 41954.0 |
| galactose-proton symporter | C9Y83_09655 | Not Available | Positive | 1984084 - 1985478 | 50985.6 |
| sprt family zinc-dependent metalloprotease | C9Y83_09660 | Not Available | Positive | 1985555 - 1986052 | 19322.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





