Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0030 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265833 bp
Thymine Count
1277245 bp
Guanine Count
1306867 bp
Cytosine Count
1287070 bp
Genome Length
5149765 bp
Protein-coding Genes
4734 genes
Non-Coding Genes
371 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl-coa decarboxylase | C9Y83_09510 | Not Available | Positive | 1955061 - 1955846 | 29130.3 |
| acetyl-coa hydrolase/transferase family protein | C9Y83_09515 | Not Available | Positive | 1955870 - 1957348 | 53858.6 |
| lysr family transcriptional regulator | C9Y83_09520 | Not Available | Negative | 1957345 - 1958241 | 34688.7 |
| oxidative stress defense protein | C9Y83_09525 | Not Available | Negative | 1958408 - 1959148 | 26636.7 |
| arginine exporter protein argo | C9Y83_09530 | Not Available | Negative | 1959241 - 1959876 | 23203.1 |
| small-conductance mechanosensitive channel | C9Y83_09535 | Not Available | Negative | 1960015 - 1960875 | 30897.9 |
| class ii fructose-bisphosphate aldolase | C9Y83_09540 | Not Available | Negative | 1961233 - 1962312 | 39149.4 |
| phosphoglycerate kinase | C9Y83_09545 | Not Available | Negative | 1962527 - 1963690 | 41120.5 |
| erythrose-4-phosphate dehydrogenase | C9Y83_09550 | Not Available | Negative | 1963740 - 1964759 | 37301.5 |
| duf296 domain-containing protein | C9Y83_09555 | Not Available | Positive | 1965131 - 1965562 | 15532.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





