Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0030 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265833 bp
Thymine Count
1277245 bp
Guanine Count
1306867 bp
Cytosine Count
1287070 bp
Genome Length
5149765 bp
Protein-coding Genes
4734 genes
Non-Coding Genes
371 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sgrr family transcriptional regulator | C9Y83_07965 | Not Available | Negative | 1666193 - 1667893 | 64966.2 |
| hmp-pp phosphatase | C9Y83_07970 | Not Available | Positive | 1667993 - 1668811 | 30330.6 |
| lrp/asnc family transcriptional regulator | C9Y83_07975 | Not Available | Positive | 1668965 - 1669423 | 17438.4 |
| smda family multidrug abc transporter permease/atp-binding protein | C9Y83_07980 | Not Available | Positive | 1669453 - 1671225 | 66006.3 |
| smdb family multidrug efflux abc transporter permease/atp-binding protein | C9Y83_07985 | Not Available | Positive | 1671218 - 1672999 | 65258.6 |
| nitrogen regulatory protein p-ii 2 | C9Y83_07990 | Not Available | Positive | 1673180 - 1673518 | 12259.9 |
| ammonia channel | C9Y83_07995 | Not Available | Positive | 1673548 - 1674834 | 44517.4 |
| acyl-coa thioesterase ii | C9Y83_08000 | Not Available | Negative | 1674882 - 1675742 | 31968.1 |
| lipoprotein | C9Y83_08005 | Not Available | Positive | 1675960 - 1676532 | 19442.3 |
| methylated-dna--[protein]-cysteine s-methyltransferase | C9Y83_08010 | Not Available | Negative | 1676563 - 1676952 | 14450.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





