Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0030 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265833 bp
Thymine Count
1277245 bp
Guanine Count
1306867 bp
Cytosine Count
1287070 bp
Genome Length
5149765 bp
Protein-coding Genes
4734 genes
Non-Coding Genes
371 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system tip protein vgrg | C9Y83_04825 | Not Available | Negative | 1012905 - 1013226 | 12219.7 |
| cu(+)/ag(+) sensor histidine kinase cuss | C9Y83_04830 | Not Available | Negative | 1013963 - 1015411 | 54107.6 |
| copper response regulator transcription factor cusr | C9Y83_04835 | Not Available | Negative | 1015401 - 1016084 | 25396.1 |
| efflux transporter outer membrane subunit | C9Y83_04840 | Not Available | Positive | 1016241 - 1017623 | 50714.9 |
| cu(+)/ag(+) efflux rnd transporter periplasmic metallochaperone cusf | C9Y83_04845 | Not Available | Positive | 1017647 - 1017979 | 12279.9 |
| cu(+)/ag(+) efflux rnd transporter periplasmic adaptor subunit cusb | C9Y83_04850 | Not Available | Positive | 1017995 - 1019218 | 44355.4 |
| cu(+)/ag(+) efflux rnd transporter permease subunit cusa | C9Y83_04855 | Not Available | Positive | 1019230 - 1022373 | 114714.0 |
| aromatic amino acid transporter arop | C9Y83_04860 | Not Available | Positive | 1022475 - 1023851 | 50648.3 |
| mechanosensitive ion channel family protein | C9Y83_04865 | Not Available | Negative | 1023919 - 1025166 | 46619.5 |
| oxygen-insensitive nad(p)h nitroreductase | C9Y83_04870 | Not Available | Negative | 1025274 - 1025927 | 23860.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





