Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0026 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1273617 bp
Thymine Count
1271644 bp
Guanine Count
1290374 bp
Cytosine Count
1302465 bp
Genome Length
5152568 bp
Protein-coding Genes
4893 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase sulfur acceptor subunit csde | C9Y79_05820 | Not Available | Positive | 1187742 - 1188185 | 15955.2 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | C9Y79_05825 | Not Available | Negative | 1188236 - 1189042 | 28563.6 |
| murein transglycosylase a | C9Y79_05830 | Not Available | Negative | 1189119 - 1190216 | 40412.9 |
| Trna-met | Not Available | Not Available | Positive | 1190425 - 1190501 | Not Available |
| type vi secretion system contractile sheath small subunit | C9Y79_05840 | Not Available | Positive | 1191135 - 1191644 | 19230.1 |
| type vi secretion system contractile sheath large subunit | C9Y79_05845 | Not Available | Positive | 1191693 - 1193231 | 58006.7 |
| type vi secretion system baseplate subunit tssk | C9Y79_05850 | Not Available | Positive | 1193249 - 1194586 | 49603.7 |
| dotu family type iv/vi secretion system protein | C9Y79_05855 | Not Available | Positive | 1194583 - 1195248 | 25281.7 |
| ompa family protein | C9Y79_05860 | Not Available | Positive | 1195261 - 1196913 | 60484.3 |
| hcp family type vi secretion system effector | C9Y79_05865 | Not Available | Positive | 1196971 - 1197462 | 18647.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





