Escherichia coli strain FWSEC0024

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0024 is a Gram-negative, rod-shaped bacterium characterized as a facultative anaerobe. It is capable of mobility, possessing flagella, and typically resides in host-associated environments. This strain shows a preference for an optimal growth temperature of 37°C, indicating its mesophilic nature. FWSEC0024 has a diverse set of hosts, including Homo sapiens (humans), Gallus gallus (chickens), Bos taurus (cattle), and various other vertebrates and invertebrates such as Canis lupus familiaris (domestic dogs), Felis catus (domestic cats), and Apis mellifera (honeybees). This broad host range underscores its ecological versatility and adaptability. The strain is known to have significant health impacts on humans, leading to a variety of conditions ranging from urinary tract infections (UTIs) and gastrointestinal infections to more severe diseases such as neonatal meningitis and hemolytic uremic syndrome (HUS). These health effects highlight the strain’s pathogenicity, particularly in human hosts. Given its free-living biotic relationship and extensive host interactions, FWSEC0024 exemplifies the complex dynamics between bacteria and their environments, including their role in human health and disease. Understanding the pathogenic mechanisms of this strain can be crucial for developing targeted interventions to mitigate its associated health risks.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0024

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0024
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0024 plasmid unnamed4

Gene Summary

Adenine Count

1326330 bp

Thymine Count

1315350 bp

Guanine Count

1331351 bp

Cytosine Count

1345189 bp

Genome Length

5334330 bp

Protein-coding Genes

4993 genes

Non-Coding Genes

330 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Baseplate assembly protein vC9Y77_09730Not AvailablePositive2006339 - 200692020108.9
Lysozyme family baseplate assembly proteinC9Y77_09735Not AvailablePositive2006917 - 200726712893.7
Baseplate j/gp47 family proteinC9Y77_09740Not AvailablePositive2007271 - 200816731946.8
Tail protein iC9Y77_09745Not AvailablePositive2008160 - 200869019879.6
Tail fiberC9Y77_09750Not AvailablePositive2008693 - 201057066658.6
AttrNot AvailableNot AvailablePositive2010329 - 2010340Not Available
AttlNot AvailableNot AvailablePositive2916740 - 2916752Not Available
Putative prophage integraseC9Y77_14280Not AvailablePositive2921355 - 292252444994.8
HelicaseC9Y77_14285Not AvailablePositive2922544 - 292440370832.6
hypothetical proteinC9Y77_14290Not AvailablePositive2924400 - 292482516606.1

Displaying genes 111 – 120 of 5327 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total