Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0022 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362979 bp
Thymine Count
1359230 bp
Guanine Count
1372012 bp
Cytosine Count
1390458 bp
Genome Length
5502255 bp
Protein-coding Genes
5191 genes
Non-Coding Genes
380 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| esci/ysci/hrpb family type iii secretion system inner rod protein | C9Y75_00165 | Not Available | Positive | 38861 - 39238 | 13383.9 |
| type iii secretion system lee inner membrane ring protein escj | C9Y75_00170 | Not Available | Positive | 39240 - 39812 | 20906.2 |
| sepd | C9Y75_00175 | Not Available | Positive | 39818 - 40273 | 17536.9 |
| type iii secretion system lee outer membrane ring protein escc | C9Y75_00180 | Not Available | Positive | 40273 - 41811 | 56576.5 |
| type iii secretion system lee chaperone cesd | C9Y75_00185 | Not Available | Positive | 41825 - 42280 | 17486.7 |
| type iii secretion system lee transcriptional regulator grla | C9Y75_00190 | Not Available | Negative | 42666 - 43079 | 16081.5 |
| negative regulator grlr | C9Y75_00195 | Not Available | Negative | 43154 - 43510 | 13313.0 |
| type iii secretion system lee muramidase etga | C9Y75_00200 | Not Available | Positive | 43707 - 44165 | 17039.5 |
| type iii secretion system lee export apparatus switch protein escu | C9Y75_00205 | Not Available | Negative | 44162 - 45199 | 39314.5 |
| type iii secretion system lee export apparatus protein esct | C9Y75_00210 | Not Available | Negative | 45192 - 45968 | 28731.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





