Escherichia coli strain FWSEC0022

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0022 is a Gram-negative, rod-shaped bacterium commonly associated with various hosts, including Homo sapiens, Gallus gallus, and Bos taurus, among others. This strain exhibits a facultative anaerobic metabolism, allowing it to thrive in both aerobic and anaerobic environments, with an optimal growth temperature of 37°C, placing it within the mesophilic temperature range. FWSEC0022 is motile, possessing flagella, and typically exists in pairs or singles. This strain has a unique biotic relationship, being free-living while also demonstrating a capacity to inhabit diverse biological environments. The range of hosts associated with this strain includes mammals, birds, and various invertebrates, indicating a broad ecological niche and potential for interaction across multiple species. FWSEC0022 is known to be pathogenic to humans, associated with numerous health effects. These include urinary tract infections (UTIs), gastrointestinal infections, neonatal meningitis, and severe conditions such as hemolytic uremic syndrome (HUS) and septicemia. The extensive list of diseases linked to this strain highlights its significant clinical relevance and potential impact on public health. The diverse range of hosts and the capacity to cause various infections suggest that E. coli strain FWSEC0022 plays a complex role in both human health and ecological systems. Its adaptability to different environments and hosts underscores the importance of monitoring this strain to understand its epidemiology and potential for disease emergence.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0022

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0022
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0022 plasmid unnamed5

Gene Summary

Adenine Count

1362979 bp

Thymine Count

1359230 bp

Guanine Count

1372012 bp

Cytosine Count

1390458 bp

Genome Length

5502255 bp

Protein-coding Genes

5191 genes

Non-Coding Genes

380 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iii secretion system lee chaperone cesd2C9Y75_00070Not AvailableNegative19586 - 1999315762.7
eaebC9Y75_00075Not AvailableNegative20000 - 2094433221.9
secretion protein espdC9Y75_00080Not AvailableNegative20965 - 2210739621.0
type iii secretion system lee translocon filament protein espaC9Y75_00085Not AvailableNegative22120 - 2269820535.1
type iii secretion system lee gatekeeper seplC9Y75_00090Not AvailableNegative22756 - 2381140007.9
type iii secretion system lee inner membrane ring protein escdC9Y75_00095Not AvailablePositive23954 - 2517445226.7
Ncrna_class:otherNot AvailableNot AvailablePositive26756 - 26880Not Available
intiminC9Y75_00100Not AvailableNegative25389 - 28208101690.0
type iii secretion system lee chaperone cestC9Y75_00105Not AvailableNegative28269 - 2873917721.9
translocated intimin receptor tirC9Y75_00110Not AvailableNegative28872 - 3048855424.1

Displaying genes 351 – 360 of 5577 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total