Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0022 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362979 bp
Thymine Count
1359230 bp
Guanine Count
1372012 bp
Cytosine Count
1390458 bp
Genome Length
5502255 bp
Protein-coding Genes
5191 genes
Non-Coding Genes
380 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shet2/espl2 family type iii secretion system effector toxin | C9Y75_00020 | Not Available | Positive | 1752 - 3401 | 62186.2 |
| type iii secretion system effector arginine glycosyltransferase nleb | C9Y75_00030 | Not Available | Positive | 4009 - 4998 | 37642.6 |
| t3ss effector protein nlee | C9Y75_00035 | Not Available | Positive | 5047 - 5721 | 26059.2 |
| Ncrna_class:other | Not Available | Not Available | Positive | 6529 - 6665 | Not Available |
| Ncrna_class:other | Not Available | Not Available | Positive | 6709 - 6845 | Not Available |
| lymphostatin efa1/lifa | C9Y75_00045 | Not Available | Positive | 7599 - 17270 | 365693.0 |
| Ncrna_class:other | Not Available | Not Available | Positive | 16812 - 16943 | Not Available |
| secretion protein espf | C9Y75_00055 | Not Available | Negative | 18205 - 18828 | 21193.0 |
| escg/yscg/ssah family type iii secretion system needle protein co-chaperone | C9Y75_00060 | Not Available | Negative | 19044 - 19322 | 10437.7 |
| type iii secretion system lee needle major subunit escf | C9Y75_00065 | Not Available | Negative | 19328 - 19549 | 8127.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





