Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0022 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362979 bp
Thymine Count
1359230 bp
Guanine Count
1372012 bp
Cytosine Count
1390458 bp
Genome Length
5502255 bp
Protein-coding Genes
5191 genes
Non-Coding Genes
380 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose import atp-binding protein rbsa | C9Y75_09515 | Not Available | Positive | 1996738 - 1998243 | 55015.0 |
| ribose abc transporter permease | C9Y75_09520 | Not Available | Positive | 1998248 - 1999213 | 33454.0 |
| ribose abc transporter substrate-binding protein rbsb | C9Y75_09525 | Not Available | Positive | 1999238 - 2000128 | 30940.2 |
| ribokinase | C9Y75_09530 | Not Available | Positive | 2000254 - 2001183 | 32292.4 |
| ribose operon repressor | C9Y75_09535 | Not Available | Positive | 2001187 - 2002179 | 36614.1 |
| dha2 family efflux mfs transporter permease subunit | C9Y75_09540 | Not Available | Negative | 2002145 - 2003572 | 51473.9 |
| fadr family transcriptional regulator | C9Y75_09545 | Not Available | Negative | 2003595 - 2004287 | 26063.5 |
| hypothetical protein | C9Y75_09555 | Not Available | Positive | 2005761 - 2005883 | 4556.71 |
| t3ss effector protein nleh | C9Y75_09560 | Not Available | Positive | 2005990 - 2006901 | 33684.6 |
| effector protein nlef | C9Y75_09565 | Not Available | Positive | 2006967 - 2007536 | 21389.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





