Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0022 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362979 bp
Thymine Count
1359230 bp
Guanine Count
1372012 bp
Cytosine Count
1390458 bp
Genome Length
5502255 bp
Protein-coding Genes
5191 genes
Non-Coding Genes
380 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel import atp-binding protein nikd | C9Y75_07225 | Not Available | Positive | 1513684 - 1514448 | 26822.1 |
| abc transporter atp-binding protein | C9Y75_07230 | Not Available | Positive | 1514445 - 1515251 | 29709.5 |
| nickel-responsive transcriptional regulator nikr | C9Y75_07235 | Not Available | Positive | 1515257 - 1515658 | 15094.7 |
| alpa family phage regulatory protein | C9Y75_07240 | Not Available | Negative | 1516000 - 1516147 | 5677.89 |
| duf4102 domain-containing protein | C9Y75_07245 | Not Available | Negative | 1516522 - 1517751 | 47139.2 |
| hypothetical protein | C9Y75_07250 | Not Available | Positive | 1517739 - 1517921 | 6985.47 |
| re/si-specific nad(p)(+) transhydrogenase subunit beta | C9Y75_07260 | Not Available | Negative | 1518858 - 1520246 | 48726.0 |
| nad(p)(+) transhydrogenase (re/si-specific) subunit alpha | C9Y75_07265 | Not Available | Negative | 1520257 - 1521789 | 54578.5 |
| duf1471 domain-containing protein | C9Y75_07270 | Not Available | Positive | 1522313 - 1523257 | 33874.9 |
| amino acid permease | C9Y75_07275 | Not Available | Positive | 1523443 - 1524825 | 49504.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





