Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0022 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362979 bp
Thymine Count
1359230 bp
Guanine Count
1372012 bp
Cytosine Count
1390458 bp
Genome Length
5502255 bp
Protein-coding Genes
5191 genes
Non-Coding Genes
380 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna(fmet)-specific endonuclease vapc | C9Y75_03700 | Not Available | Negative | 764816 - 765214 | 14895.2 |
| antitoxin | C9Y75_03705 | Not Available | Negative | 765214 - 765441 | 8499.05 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | C9Y75_03710 | Not Available | Negative | 765595 - 766308 | 26996.5 |
| outer membrane protein assembly factor bamc | C9Y75_03715 | Not Available | Negative | 766521 - 767555 | 36844.5 |
| 4-hydroxy-tetrahydrodipicolinate synthase | C9Y75_03720 | Not Available | Negative | 767572 - 768450 | 31271.8 |
| glycine cleavage system transcriptional repressor | C9Y75_03725 | Not Available | Positive | 768596 - 769168 | 20769.8 |
| thioredoxin-dependent thiol peroxidase | C9Y75_03730 | Not Available | Positive | 769168 - 769638 | 17634.9 |
| 4fe-4s dicluster domain-containing protein | C9Y75_03735 | Not Available | Positive | 769891 - 770508 | 22197.6 |
| hydrogenase 4 subunit b | C9Y75_03740 | Not Available | Positive | 770508 - 772526 | 72673.5 |
| hydrogenase 3 membrane subunit | C9Y75_03745 | Not Available | Positive | 772537 - 773484 | 34351.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





