Halocatena pleomorpha strain SPP-AMP-1

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natronomonadaceae

Genus

Halocatena

Description

Halocatena pleomorpha strain SPP-AMP-1 is characterized by a single replicon, indicating a streamlined genomic structure. This trait can suggest certain advantages in terms of genetic stability and replication efficiency. The strain is cataloged under the accession number RRCH00000000.1, which serves as a reference for researchers seeking to access its genomic data for further studies. Given its classification within the genus Halocatena, this strain is expected to thrive in hypersaline environments, a characteristic common to members of this genus. The ability to adapt to extreme saline conditions can provide insights into the ecological roles of Halocatena pleomorpha in such ecosystems, where it may contribute to nutrient cycling and the maintenance of microbial diversity. In summary, Halocatena pleomorpha strain SPP-AMP-1, with its unique genomic structure and adaptation to high salinity, exemplifies the resilience of microorganisms in harsh environments, potentially influencing the ecological dynamics of microbial communities in saline habitats.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatronomonadaceae
GenusHalocatena
SpeciesHalocatena pleomorpha
Strainstrain SPP-AMP-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halocatena pleomorpha strain SPP-AMP-1

Gene Summary

Adenine Count

785026 bp

Thymine Count

782723 bp

Guanine Count

1043952 bp

Cytosine Count

1043648 bp

Genome Length

3658589 bp

Protein-coding Genes

3340 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
disulfide bond formation protein dsbaEIK79_03990Not AvailablePositive782654 - 78348730683.7
hypothetical proteinEIK79_03995Not AvailableNegative783507 - 7837047385.69
type iv pilinEIK79_04000Not AvailableNegative783798 - 78456827368.3
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabcEIK79_04005Not AvailableNegative784661 - 78581540689.3
srpbcc family proteinEIK79_04010Not AvailablePositive785931 - 78646120118.2
twin-arginine translocation signal domain-containing proteinEIK79_04015Not AvailableNegative786477 - 78726526648.3
m42 family peptidaseEIK79_04020Not AvailableNegative787317 - 78837838097.4
polyprenyl synthetase family proteinEIK79_04025Not AvailableNegative788468 - 78953240025.1
Trna-metNot AvailableNot AvailablePositive789640 - 789714Not Available
hypothetical proteinEIK79_04035Not AvailableNegative789774 - 79148362668.3

Displaying genes 751 – 760 of 3388 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.