Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Natronomonadaceae
Genus
Halocatena
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Natronomonadaceae |
| Genus | Halocatena |
| Species | Halocatena pleomorpha |
| Strain | strain SPP-AMP-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
785026 bp
Thymine Count
782723 bp
Guanine Count
1043952 bp
Cytosine Count
1043648 bp
Genome Length
3658589 bp
Protein-coding Genes
3340 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-antigen ligase domain-containing protein | EIK79_15975 | Not Available | Positive | 3303352 - 3304953 | 56580.2 |
| glycosyltransferase | EIK79_15980 | Not Available | Positive | 3305037 - 3306146 | 41388.8 |
| glycosyl/glycerophosphate transferase | EIK79_15985 | Not Available | Negative | 3306198 - 3307394 | 45290.1 |
| phosphocholine cytidylyltransferase family protein | EIK79_15990 | Not Available | Negative | 3307407 - 3308105 | 25850.9 |
| hypothetical protein | EIK79_15995 | Not Available | Positive | 3308558 - 3309337 | 29964.4 |
| flippase | EIK79_16000 | Not Available | Positive | 3309419 - 3310930 | 54178.1 |
| lipoyl synthase | EIK79_16005 | Not Available | Negative | 3310934 - 3311866 | 34693.8 |
| mate family efflux transporter | EIK79_16010 | Not Available | Positive | 3311968 - 3313443 | 50563.9 |
| hypothetical protein | EIK79_16015 | Not Available | Positive | 3313574 - 3314326 | 27617.2 |
| dead/deah box helicase | EIK79_16020 | Not Available | Positive | 3314387 - 3316720 | 85125.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
