Halocatena pleomorpha strain SPP-AMP-1

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natronomonadaceae

Genus

Halocatena

Description

Halocatena pleomorpha strain SPP-AMP-1 is characterized by a single replicon, indicating a streamlined genomic structure. This trait can suggest certain advantages in terms of genetic stability and replication efficiency. The strain is cataloged under the accession number RRCH00000000.1, which serves as a reference for researchers seeking to access its genomic data for further studies. Given its classification within the genus Halocatena, this strain is expected to thrive in hypersaline environments, a characteristic common to members of this genus. The ability to adapt to extreme saline conditions can provide insights into the ecological roles of Halocatena pleomorpha in such ecosystems, where it may contribute to nutrient cycling and the maintenance of microbial diversity. In summary, Halocatena pleomorpha strain SPP-AMP-1, with its unique genomic structure and adaptation to high salinity, exemplifies the resilience of microorganisms in harsh environments, potentially influencing the ecological dynamics of microbial communities in saline habitats.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatronomonadaceae
GenusHalocatena
SpeciesHalocatena pleomorpha
Strainstrain SPP-AMP-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halocatena pleomorpha strain SPP-AMP-1

Gene Summary

Adenine Count

785026 bp

Thymine Count

782723 bp

Guanine Count

1043952 bp

Cytosine Count

1043648 bp

Genome Length

3658589 bp

Protein-coding Genes

3340 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hit domain-containing proteinEIK79_15405Not AvailableNegative3188422 - 318896119710.7
hypothetical proteinEIK79_15410Not AvailablePositive3189207 - 31894137501.88
aminodeoxychorismate/anthranilate synthase component iiEIK79_15415Not AvailableNegative3189410 - 319002421905.7
anthranilate synthase component iEIK79_15420Not AvailableNegative3190021 - 319166759496.9
phosphoribosylanthranilate isomeraseEIK79_15425Not AvailableNegative3191664 - 319233522701.1
anthranilate phosphoribosyltransferaseEIK79_15430Not AvailableNegative3192332 - 319333934708.8
Trna-valNot AvailableNot AvailablePositive3193523 - 3193597Not Available
crispr-associated endonuclease cas2EIK79_15440Not AvailableNegative3193896 - 319416810462.2
type i-d crispr-associated helicase cas3'EIK79_15450Not AvailableNegative3194343 - 319652981714.2
type i-d crispr-associated protein cas5/csc1EIK79_15455Not AvailableNegative3196526 - 319726027532.3

Displaying genes 2941 – 2950 of 3388 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.