Halocatena pleomorpha strain SPP-AMP-1

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natronomonadaceae

Genus

Halocatena

Description

Halocatena pleomorpha strain SPP-AMP-1 is characterized by a single replicon, indicating a streamlined genomic structure. This trait can suggest certain advantages in terms of genetic stability and replication efficiency. The strain is cataloged under the accession number RRCH00000000.1, which serves as a reference for researchers seeking to access its genomic data for further studies. Given its classification within the genus Halocatena, this strain is expected to thrive in hypersaline environments, a characteristic common to members of this genus. The ability to adapt to extreme saline conditions can provide insights into the ecological roles of Halocatena pleomorpha in such ecosystems, where it may contribute to nutrient cycling and the maintenance of microbial diversity. In summary, Halocatena pleomorpha strain SPP-AMP-1, with its unique genomic structure and adaptation to high salinity, exemplifies the resilience of microorganisms in harsh environments, potentially influencing the ecological dynamics of microbial communities in saline habitats.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatronomonadaceae
GenusHalocatena
SpeciesHalocatena pleomorpha
Strainstrain SPP-AMP-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halocatena pleomorpha strain SPP-AMP-1

Gene Summary

Adenine Count

785026 bp

Thymine Count

782723 bp

Guanine Count

1043952 bp

Cytosine Count

1043648 bp

Genome Length

3658589 bp

Protein-coding Genes

3340 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinEIK79_08380Not AvailableNegative1690095 - 169039111671.7
uracil phosphoribosyltransferaseEIK79_08385Not AvailablePositive1690572 - 169124924012.5
yigz family proteinEIK79_08390Not AvailableNegative1691397 - 169201121799.9
duf424 family proteinEIK79_08395Not AvailableNegative1692016 - 169231210631.3
hypothetical proteinEIK79_08400Not AvailableNegative1692315 - 169304327327.8
rna 2',3'-cyclic phosphodiesteraseEIK79_08405Not AvailablePositive1693095 - 169364320233.8
50s ribosomal protein l39eEIK79_08410Not AvailablePositive1693691 - 16938436057.49
50s ribosomal protein l31eEIK79_08415Not AvailablePositive1693847 - 169412210321.2
translation initiation factor if-6EIK79_08420Not AvailablePositive1694126 - 169479122716.7
50s ribosomal protein l18aEIK79_08425Not AvailablePositive1694827 - 16950006540.43

Displaying genes 1591 – 1600 of 3388 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.