Fretibacterium sp. OH1220_COT-178

Kingdom

Thermotogati

Phylum

Synergistota

Class

Synergistia

Order

Synergistales

Family

Aminobacteriaceae

Genus

Fretibacterium

Description

Fretibacterium sp. OH1220_COT-178 is characterized by having a single replicon, indicating a streamlined genomic structure. The accession number for this organism is RQYL00000000.1, which serves as a unique identifier for its genomic sequence in databases. This bacterium belongs to the genus Fretibacterium, which is known to include anaerobic, Gram-negative microorganisms. The specific ecological role and metabolic capabilities of Fretibacterium sp. OH1220_COT-178 are not detailed, but members of this genus are typically associated with diverse environments, including those linked to complex microbial communities. The presence of a single replicon can suggest a level of genomic stability and adaptability, which may be advantageous for survival in particular niches. This trait may reflect an evolutionary strategy that allows the organism to efficiently manage its genetic resources in response to environmental pressures. Understanding the genomic characteristics of Fretibacterium sp. OH1220_COT-178 could provide insights into its potential roles in microbial interactions, nutrient cycling, or its contributions to ecological systems where it is found.

Taxonomy

KingdomThermotogati
PhylumSynergistota
ClassSynergistia
OrderSynergistales
FamilyAminobacteriaceae
GenusFretibacterium
SpeciesFretibacterium sp. OH1220_COT-178
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Fretibacterium sp. OH1220_COT-178 scaffold_104, whole genome

Gene Summary

Adenine Count

530685 bp

Thymine Count

534846 bp

Guanine Count

899378 bp

Cytosine Count

900255 bp

Genome Length

2872901 bp

Protein-coding Genes

2511 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nicotinate-nucleotide adenylyltransferaseEII26_00250Not AvailableNegative50362 - 5093721595.1
gtpase obgeEII26_00255Not AvailableNegative51047 - 5234846531.1
50s ribosomal protein l27EII26_00260Not AvailableNegative52607 - 5289410480.6
ribosomal-processing cysteine protease prpEII26_00265Not AvailableNegative52891 - 5321711767.4
50s ribosomal protein l21EII26_00270Not AvailableNegative53235 - 5354611496.0
serine dehydratase subunit alpha family proteinEII26_00275Not AvailablePositive53989 - 5526644110.7
abc transporter substrate-binding proteinEII26_00280Not AvailablePositive55333 - 5683556031.7
abc transporter substrate-binding proteinEII26_00285Not AvailableNegative56920 - 5807141851.2
Ncrna_class:srp_rnaNot AvailableNot AvailablePositive58527 - 58626Not Available
30s ribosomal protein s4EII26_00290Not AvailableNegative58343 - 5893922840.1

Displaying genes 51 – 60 of 2564 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.