Fretibacterium sp. OH1220_COT-178

Kingdom

Thermotogati

Phylum

Synergistota

Class

Synergistia

Order

Synergistales

Family

Aminobacteriaceae

Genus

Fretibacterium

Description

Fretibacterium sp. OH1220_COT-178 is characterized by having a single replicon, indicating a streamlined genomic structure. The accession number for this organism is RQYL00000000.1, which serves as a unique identifier for its genomic sequence in databases. This bacterium belongs to the genus Fretibacterium, which is known to include anaerobic, Gram-negative microorganisms. The specific ecological role and metabolic capabilities of Fretibacterium sp. OH1220_COT-178 are not detailed, but members of this genus are typically associated with diverse environments, including those linked to complex microbial communities. The presence of a single replicon can suggest a level of genomic stability and adaptability, which may be advantageous for survival in particular niches. This trait may reflect an evolutionary strategy that allows the organism to efficiently manage its genetic resources in response to environmental pressures. Understanding the genomic characteristics of Fretibacterium sp. OH1220_COT-178 could provide insights into its potential roles in microbial interactions, nutrient cycling, or its contributions to ecological systems where it is found.

Taxonomy

KingdomThermotogati
PhylumSynergistota
ClassSynergistia
OrderSynergistales
FamilyAminobacteriaceae
GenusFretibacterium
SpeciesFretibacterium sp. OH1220_COT-178
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Fretibacterium sp. OH1220_COT-178 scaffold_104, whole genome

Gene Summary

Adenine Count

530685 bp

Thymine Count

534846 bp

Guanine Count

899378 bp

Cytosine Count

900255 bp

Genome Length

2872901 bp

Protein-coding Genes

2511 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase queaEII26_01500Not AvailableNegative314513 - 31561940851.1
spoiid/lytb domain-containing proteinEII26_01505Not AvailableNegative315616 - 31712153973.8
holliday junction branch migration dna helicase ruvbEII26_01510Not AvailableNegative317173 - 31822538460.4
holliday junction branch migration protein ruvaEII26_01515Not AvailableNegative318253 - 31887322017.9
crossover junction endodeoxyribonuclease ruvcEII26_01520Not AvailableNegative318870 - 31941819389.7
yebc/pmpr family dna-binding transcriptional regulatorEII26_01525Not AvailableNegative319418 - 32017027329.4
nad(+) synthaseEII26_01530Not AvailableNegative320254 - 32099126177.4
gdp-l-fucose synthaseEII26_01535Not AvailableNegative321161 - 32209934721.6
gdp-mannose 4,6-dehydrataseEII26_01540Not AvailableNegative322111 - 32319941649.3
hypothetical proteinEII26_01545Not AvailableNegative323265 - 32499265759.6

Displaying genes 301 – 310 of 2564 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.