Amphritea opalescens strain ANRC-JH13

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Oceanospirillaceae

Genus

Amphritea

Description

Amphritea opalescens strain ANRC-JH13 is characterized as a Gram-negative, rod-shaped bacterium. It possesses a single replicon, which is significant for its genetic stability and potential for efficient replication. The genomic information for this strain is accessible under the accession number RQXW00000000.1, providing a resource for researchers interested in its genetic makeup and potential applications. As a member of the Amphritea genus, this strain may exhibit unique metabolic capabilities and ecological roles, particularly in marine environments where many members of this genus are found. The Gram-negative classification suggests that Amphritea opalescens strain ANRC-JH13 has a complex cell wall structure, which can influence its interactions with other microorganisms and its resilience to environmental stresses. Understanding the characteristics of Amphritea opalescens strain ANRC-JH13 can provide insights into its ecological niche and potential biotechnological applications. The strain's single replicon may allow for easier genetic manipulation, which could be beneficial in exploring its metabolic pathways or in bioremediation efforts, especially in marine contexts. Additionally, the study of its ecological interactions may reveal its role in nutrient cycling or its impact on other microbial communities in its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyOceanospirillaceae
GenusAmphritea
SpeciesAmphritea opalescens
Strainstrain ANRC-JH13

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amphritea opalescens strain ANRC-JH13

Gene Summary

Adenine Count

1045600 bp

Thymine Count

1078682 bp

Guanine Count

1024688 bp

Cytosine Count

975932 bp

Genome Length

4127332 bp

Protein-coding Genes

3581 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinEH243_16290Not AvailableNegative3635652 - 363603514262.7
hypothetical proteinEH243_16295Not AvailablePositive3636405 - 363675513009.6
hypothetical proteinEH243_16300Not AvailableNegative3636760 - 363722416847.5
polyribonucleotide nucleotidyltransferaseEH243_16305Not AvailableNegative3637317 - 363941975683.7
30s ribosomal protein s15EH243_16310Not AvailableNegative3639639 - 363990810282.6
trna pseudouridine(55) synthase trubEH243_16315Not AvailableNegative3640040 - 364099634981.2
30s ribosome-binding factor rbfaEH243_16320Not AvailableNegative3641000 - 364139514885.9
translation initiation factor if-2EH243_16325Not AvailableNegative3641416 - 364400492553.0
transcription termination/antitermination protein nusaEH243_16330Not AvailableNegative3644028 - 364551554742.9
ribosome maturation factor rimpEH243_16335Not AvailableNegative3645552 - 364600716995.5

Displaying genes 3231 – 3240 of 3660 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.