Amphritea opalescens strain ANRC-JH13

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Oceanospirillaceae

Genus

Amphritea

Description

Amphritea opalescens strain ANRC-JH13 is characterized as a Gram-negative, rod-shaped bacterium. It possesses a single replicon, which is significant for its genetic stability and potential for efficient replication. The genomic information for this strain is accessible under the accession number RQXW00000000.1, providing a resource for researchers interested in its genetic makeup and potential applications. As a member of the Amphritea genus, this strain may exhibit unique metabolic capabilities and ecological roles, particularly in marine environments where many members of this genus are found. The Gram-negative classification suggests that Amphritea opalescens strain ANRC-JH13 has a complex cell wall structure, which can influence its interactions with other microorganisms and its resilience to environmental stresses. Understanding the characteristics of Amphritea opalescens strain ANRC-JH13 can provide insights into its ecological niche and potential biotechnological applications. The strain's single replicon may allow for easier genetic manipulation, which could be beneficial in exploring its metabolic pathways or in bioremediation efforts, especially in marine contexts. Additionally, the study of its ecological interactions may reveal its role in nutrient cycling or its impact on other microbial communities in its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyOceanospirillaceae
GenusAmphritea
SpeciesAmphritea opalescens
Strainstrain ANRC-JH13

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amphritea opalescens strain ANRC-JH13

Gene Summary

Adenine Count

1045600 bp

Thymine Count

1078682 bp

Guanine Count

1024688 bp

Cytosine Count

975932 bp

Genome Length

4127332 bp

Protein-coding Genes

3581 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flavodoxin family proteinEH243_15325Not AvailableNegative3415155 - 341561616945.5
diadenosine tetraphosphate hydrolaseEH243_15330Not AvailablePositive3415703 - 341655731463.0
fad-binding oxidoreductaseEH243_15335Not AvailableNegative3416656 - 341793347032.5
ornithine cyclodeaminase family proteinEH243_15340Not AvailableNegative3418033 - 341899534689.6
hd domain-containing proteinEH243_15345Not AvailablePositive3419439 - 342103160465.5
adenylate/guanylate cyclase domain-containing proteinEH243_15350Not AvailableNegative3421059 - 342325482496.4
3',5'-cyclic-nucleotide phosphodiesteraseEH243_15355Not AvailablePositive3423485 - 342424628088.3
hypothetical proteinEH243_15360Not AvailableNegative3424307 - 342592656247.5
duf560 domain-containing proteinEH243_15365Not AvailableNegative3425935 - 342725149486.3
duf1289 domain-containing proteinEH243_15370Not AvailablePositive3427473 - 34276827985.42

Displaying genes 3041 – 3050 of 3660 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.