Amphritea opalescens strain ANRC-JH13

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Oceanospirillaceae

Genus

Amphritea

Description

Amphritea opalescens strain ANRC-JH13 is characterized as a Gram-negative, rod-shaped bacterium. It possesses a single replicon, which is significant for its genetic stability and potential for efficient replication. The genomic information for this strain is accessible under the accession number RQXW00000000.1, providing a resource for researchers interested in its genetic makeup and potential applications. As a member of the Amphritea genus, this strain may exhibit unique metabolic capabilities and ecological roles, particularly in marine environments where many members of this genus are found. The Gram-negative classification suggests that Amphritea opalescens strain ANRC-JH13 has a complex cell wall structure, which can influence its interactions with other microorganisms and its resilience to environmental stresses. Understanding the characteristics of Amphritea opalescens strain ANRC-JH13 can provide insights into its ecological niche and potential biotechnological applications. The strain's single replicon may allow for easier genetic manipulation, which could be beneficial in exploring its metabolic pathways or in bioremediation efforts, especially in marine contexts. Additionally, the study of its ecological interactions may reveal its role in nutrient cycling or its impact on other microbial communities in its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyOceanospirillaceae
GenusAmphritea
SpeciesAmphritea opalescens
Strainstrain ANRC-JH13

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amphritea opalescens strain ANRC-JH13

Gene Summary

Adenine Count

1045600 bp

Thymine Count

1078682 bp

Guanine Count

1024688 bp

Cytosine Count

975932 bp

Genome Length

4127332 bp

Protein-coding Genes

3581 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transporterEH243_06810Not AvailableNegative1559070 - 156034445974.5
efflux rnd transporter permease subunitEH243_06815Not AvailableNegative1560377 - 1563451112578.0
efflux rnd transporter periplasmic adaptor subunitEH243_06820Not AvailableNegative1563454 - 156452738560.9
tetr family transcriptional regulatorEH243_06825Not AvailableNegative1564524 - 156513823277.2
pyridoxal phosphate-dependent aminotransferaseEH243_06830Not AvailableNegative1565342 - 156652342291.7
excinuclease abc subunit uvrbEH243_06835Not AvailablePositive1566785 - 156879775809.7
alanine dehydrogenaseEH243_06840Not AvailableNegative1569478 - 157060239473.0
ghkl domain-containing proteinEH243_06845Not AvailableNegative1570838 - 157145822792.1
hypothetical proteinEH243_06850Not AvailablePositive1571453 - 157178211653.8
heme utilization protein hutzEH243_06855Not AvailableNegative1571861 - 157238519160.6

Displaying genes 1361 – 1370 of 3660 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.