Bradyrhizobium sp. RP6

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Bradyrhizobium

Description

Bradyrhizobium sp. RP6 is a rod-shaped bacterium characterized by the presence of flagella, which contribute to its motility. This species has a single replicon, indicating a streamlined genomic structure that can facilitate efficient replication and cellular processes. The genomic information for Bradyrhizobium sp. RP6 is cataloged under the accession number RQIT00000000.1, providing a reference for further studies and comparisons within the Bradyrhizobium genus. As a member of the Bradyrhizobium genus, this bacterium is likely involved in symbiotic relationships with legumes, which are crucial for nitrogen fixation in agriculture. The presence of flagella suggests that Bradyrhizobium sp. RP6 may actively navigate towards plant roots, enhancing its ability to establish symbiosis. The rod shape may also play a role in its interaction with the rhizosphere, allowing it to occupy specific ecological niches effectively. Understanding the traits of Bradyrhizobium sp. RP6 can provide insights into its ecological role, particularly in nitrogen cycling within soil ecosystems. The ability to form symbiotic relationships with legumes not only benefits the bacterial species but also contributes to soil fertility and agricultural productivity. This highlights the importance of studying such microorganisms to improve sustainable agricultural practices and ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusBradyrhizobium
SpeciesBradyrhizobium sp. RP6
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bradyrhizobium sp. RP6 NODE_86_length_230_cov_77.301, whole genome

Gene Summary

Adenine Count

1396060 bp

Thymine Count

1398282 bp

Guanine Count

2470569 bp

Cytosine Count

2445947 bp

Genome Length

7717726 bp

Protein-coding Genes

6897 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gdp-l-fucose synthaseEHH60_33650Not AvailableNegative6989380 - 699032434285.3
gdp-mannose 4,6-dehydrataseEHH60_33655Not AvailableNegative6990305 - 699139040204.9
glutamine--fructose-6-phosphate transaminase (isomerizing)EHH60_33660Not AvailablePositive6992629 - 699445565408.8
effector protein noppEHH60_33665Not AvailablePositive6995067 - 699589130643.2
response regulatorEHH60_33675Not AvailableNegative6997168 - 699755713742.6
dna-binding response regulatorEHH60_33680Not AvailableNegative6997642 - 699832524954.4
pas domain s-box proteinEHH60_33685Not AvailableNegative6998322 - 700099499614.9
c4-dicarboxylate transporter dctaEHH60_33690Not AvailableNegative7001814 - 700313646504.1
twin-arginine translocation signal domain-containing proteinEHH60_33705Not AvailablePositive7007082 - 700818239844.0
nickel-dependent hydrogenase large subunitEHH60_33710Not AvailablePositive7008195 - 700998566067.2

Displaying genes 6461 – 6470 of 6990 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.