Bradyrhizobium sp. RP6

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Bradyrhizobium

Description

Bradyrhizobium sp. RP6 is a rod-shaped bacterium characterized by the presence of flagella, which contribute to its motility. This species has a single replicon, indicating a streamlined genomic structure that can facilitate efficient replication and cellular processes. The genomic information for Bradyrhizobium sp. RP6 is cataloged under the accession number RQIT00000000.1, providing a reference for further studies and comparisons within the Bradyrhizobium genus. As a member of the Bradyrhizobium genus, this bacterium is likely involved in symbiotic relationships with legumes, which are crucial for nitrogen fixation in agriculture. The presence of flagella suggests that Bradyrhizobium sp. RP6 may actively navigate towards plant roots, enhancing its ability to establish symbiosis. The rod shape may also play a role in its interaction with the rhizosphere, allowing it to occupy specific ecological niches effectively. Understanding the traits of Bradyrhizobium sp. RP6 can provide insights into its ecological role, particularly in nitrogen cycling within soil ecosystems. The ability to form symbiotic relationships with legumes not only benefits the bacterial species but also contributes to soil fertility and agricultural productivity. This highlights the importance of studying such microorganisms to improve sustainable agricultural practices and ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusBradyrhizobium
SpeciesBradyrhizobium sp. RP6
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bradyrhizobium sp. RP6 NODE_86_length_230_cov_77.301, whole genome

Gene Summary

Adenine Count

1396060 bp

Thymine Count

1398282 bp

Guanine Count

2470569 bp

Cytosine Count

2445947 bp

Genome Length

7717726 bp

Protein-coding Genes

6897 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hlyd family secretion proteinEHH60_30710Not AvailablePositive6374270 - 637552945001.7
dha2 family efflux mfs transporter permease subunitEHH60_30715Not AvailablePositive6375635 - 637724257249.2
carboxymuconolactone decarboxylase family proteinEHH60_30720Not AvailablePositive6377271 - 637773217295.8
d-amino-acid transaminaseEHH60_30725Not AvailableNegative6377927 - 637878730849.3
amino acid abc transporter atp-binding proteinEHH60_30730Not AvailableNegative6378992 - 637972326987.0
abc transporter permease subunitEHH60_30735Not AvailableNegative6379736 - 638042825462.8
amino acid abc transporter permeaseEHH60_30740Not AvailableNegative6380432 - 638116326856.6
amino acid abc transporter substrate-binding proteinEHH60_30745Not AvailableNegative6381281 - 638219232923.4
m20 peptidase family dipeptidaseEHH60_30750Not AvailableNegative6382304 - 638368949857.2
llm class flavin-dependent oxidoreductaseEHH60_30755Not AvailablePositive6383955 - 638533450955.1

Displaying genes 5931 – 5940 of 6990 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.