Bradyrhizobium sp. RP6

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Bradyrhizobium

Description

Bradyrhizobium sp. RP6 is a rod-shaped bacterium characterized by the presence of flagella, which contribute to its motility. This species has a single replicon, indicating a streamlined genomic structure that can facilitate efficient replication and cellular processes. The genomic information for Bradyrhizobium sp. RP6 is cataloged under the accession number RQIT00000000.1, providing a reference for further studies and comparisons within the Bradyrhizobium genus. As a member of the Bradyrhizobium genus, this bacterium is likely involved in symbiotic relationships with legumes, which are crucial for nitrogen fixation in agriculture. The presence of flagella suggests that Bradyrhizobium sp. RP6 may actively navigate towards plant roots, enhancing its ability to establish symbiosis. The rod shape may also play a role in its interaction with the rhizosphere, allowing it to occupy specific ecological niches effectively. Understanding the traits of Bradyrhizobium sp. RP6 can provide insights into its ecological role, particularly in nitrogen cycling within soil ecosystems. The ability to form symbiotic relationships with legumes not only benefits the bacterial species but also contributes to soil fertility and agricultural productivity. This highlights the importance of studying such microorganisms to improve sustainable agricultural practices and ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusBradyrhizobium
SpeciesBradyrhizobium sp. RP6
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bradyrhizobium sp. RP6 NODE_86_length_230_cov_77.301, whole genome

Gene Summary

Adenine Count

1396060 bp

Thymine Count

1398282 bp

Guanine Count

2470569 bp

Cytosine Count

2445947 bp

Genome Length

7717726 bp

Protein-coding Genes

6897 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
adenylate/guanylate cyclase domain-containing proteinEHH60_29165Not AvailablePositive6045463 - 604722965192.6
duf882 domain-containing proteinEHH60_29170Not AvailableNegative6047278 - 604893658332.4
murein l,d-transpeptidaseEHH60_29175Not AvailableNegative6049210 - 605141779321.0
sigma-54-dependent fis family transcriptional regulatorEHH60_29180Not AvailableNegative6051768 - 605326453524.0
m3 family oligoendopeptidaseEHH60_29185Not AvailablePositive6053392 - 605531471229.0
abrb family transcriptional regulatorEHH60_29190Not AvailablePositive6055416 - 60556408470.42
type ii toxin-antitoxin system death-on-curing family toxinEHH60_29195Not AvailablePositive6055652 - 605604714603.4
aa3-type cytochrome c oxidase subunit ivEHH60_29200Not AvailablePositive6056145 - 60562975482.56
re/si-specific nad(p)(+) transhydrogenase subunit alphaEHH60_29205Not AvailablePositive6056435 - 605756539464.8
nad(p) transhydrogenase subunit alphaEHH60_29210Not AvailablePositive6057588 - 605790511232.2

Displaying genes 5641 – 5650 of 6990 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.