Bradyrhizobium sp. RP6

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Bradyrhizobium

Description

Bradyrhizobium sp. RP6 is a rod-shaped bacterium characterized by the presence of flagella, which contribute to its motility. This species has a single replicon, indicating a streamlined genomic structure that can facilitate efficient replication and cellular processes. The genomic information for Bradyrhizobium sp. RP6 is cataloged under the accession number RQIT00000000.1, providing a reference for further studies and comparisons within the Bradyrhizobium genus. As a member of the Bradyrhizobium genus, this bacterium is likely involved in symbiotic relationships with legumes, which are crucial for nitrogen fixation in agriculture. The presence of flagella suggests that Bradyrhizobium sp. RP6 may actively navigate towards plant roots, enhancing its ability to establish symbiosis. The rod shape may also play a role in its interaction with the rhizosphere, allowing it to occupy specific ecological niches effectively. Understanding the traits of Bradyrhizobium sp. RP6 can provide insights into its ecological role, particularly in nitrogen cycling within soil ecosystems. The ability to form symbiotic relationships with legumes not only benefits the bacterial species but also contributes to soil fertility and agricultural productivity. This highlights the importance of studying such microorganisms to improve sustainable agricultural practices and ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusBradyrhizobium
SpeciesBradyrhizobium sp. RP6
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bradyrhizobium sp. RP6 NODE_86_length_230_cov_77.301, whole genome

Gene Summary

Adenine Count

1396060 bp

Thymine Count

1398282 bp

Guanine Count

2470569 bp

Cytosine Count

2445947 bp

Genome Length

7717726 bp

Protein-coding Genes

6897 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
proline hydroxylaseEHH60_17650Not AvailablePositive3612967 - 361371327775.2
dna oxidative demethylase alkbEHH60_17655Not AvailablePositive3613723 - 361437623849.5
hypothetical proteinEHH60_17660Not AvailableNegative3614432 - 361606057963.7
faa hydrolase family proteinEHH60_17665Not AvailableNegative3616086 - 361695531640.6
3,4-dihydroxyphenylacetate 2,3-dioxygenaseEHH60_17670Not AvailableNegative3616955 - 361793837472.2
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseEHH60_17675Not AvailableNegative3618046 - 361958455079.0
5-carboxymethyl-2-hydroxymuconate delta-isomeraseEHH60_17680Not AvailableNegative3619577 - 361997514776.5
2-oxo-hepta-3-ene-1,7-dioic acid hydrataseEHH60_17685Not AvailableNegative3620003 - 362080928901.7
homoprotocatechuate degradation operon regulator hparEHH60_17690Not AvailablePositive3620921 - 362143919000.1
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolaseEHH60_17695Not AvailablePositive3621554 - 362233027844.8

Displaying genes 3421 – 3430 of 6990 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.