Paraburkholderia dinghuensis strain DHOA04

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Paraburkholderia dinghuensis strain DHOA04 is characterized as a rod-shaped bacterium with a notable presence of flagella, which suggests potential motility and adaptability in its environment. This strain possesses a single replicon, indicating a streamlined genomic structure that may contribute to its efficiency in replication and resource utilization. The genomic data for Paraburkholderia dinghuensis strain DHOA04 can be accessed under the accession number RQIS00000000.1, providing a basis for further genomic and functional studies. The single replicon structure could be advantageous for this organism, allowing it to manage its genetic material effectively while potentially responding to environmental stresses. From a biological and ecological perspective, the motility associated with flagella could facilitate the colonization of diverse habitats, thereby enhancing its ecological role. The ability to move toward nutrient sources or away from unfavorable conditions may allow Paraburkholderia dinghuensis strain DHOA04 to thrive in varied environments. Such traits may also indicate its potential as a participant in biogeochemical cycles or interactions with other microorganisms, contributing to nutrient cycling and ecosystem dynamics. In summary, the rod shape, presence of flagella, and single replicon of Paraburkholderia dinghuensis strain DHOA04 underscore its adaptability and potential ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesParaburkholderia dinghuensis
Strainstrain DHOA04

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraburkholderia dinghuensis strain DHOA04 scaffold59, whole

Gene Summary

Adenine Count

1124459 bp

Thymine Count

1131864 bp

Guanine Count

1927888 bp

Cytosine Count

1911986 bp

Genome Length

6101351 bp

Protein-coding Genes

5162 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-dehydro-3-deoxyglucarate aldolaseD1Y85_20420Not AvailablePositive4633323 - 463410527591.1
sel1 repeat family proteinD1Y85_20425Not AvailablePositive4634102 - 463481825323.4
rod shape-determining protein rodaD1Y85_20430Not AvailableNegative4634855 - 463602142566.7
penicillin-binding protein 2D1Y85_20435Not AvailableNegative4636032 - 463852488569.9
rod shape-determining protein mredD1Y85_20440Not AvailableNegative4638651 - 463916318820.7
rod shape-determining protein mrecD1Y85_20445Not AvailableNegative4639163 - 464032040197.0
rod shape-determining proteinD1Y85_20450Not AvailableNegative4640460 - 464150336954.9
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatcD1Y85_20455Not AvailablePositive4642010 - 464230910868.1
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gataD1Y85_20460Not AvailablePositive4642484 - 464397452966.0
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatbD1Y85_20465Not AvailablePositive4643977 - 464545253744.1

Displaying genes 4001 – 4010 of 5226 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.