Paraburkholderia dinghuensis strain DHOA04

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Paraburkholderia dinghuensis strain DHOA04 is characterized as a rod-shaped bacterium with a notable presence of flagella, which suggests potential motility and adaptability in its environment. This strain possesses a single replicon, indicating a streamlined genomic structure that may contribute to its efficiency in replication and resource utilization. The genomic data for Paraburkholderia dinghuensis strain DHOA04 can be accessed under the accession number RQIS00000000.1, providing a basis for further genomic and functional studies. The single replicon structure could be advantageous for this organism, allowing it to manage its genetic material effectively while potentially responding to environmental stresses. From a biological and ecological perspective, the motility associated with flagella could facilitate the colonization of diverse habitats, thereby enhancing its ecological role. The ability to move toward nutrient sources or away from unfavorable conditions may allow Paraburkholderia dinghuensis strain DHOA04 to thrive in varied environments. Such traits may also indicate its potential as a participant in biogeochemical cycles or interactions with other microorganisms, contributing to nutrient cycling and ecosystem dynamics. In summary, the rod shape, presence of flagella, and single replicon of Paraburkholderia dinghuensis strain DHOA04 underscore its adaptability and potential ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesParaburkholderia dinghuensis
Strainstrain DHOA04

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraburkholderia dinghuensis strain DHOA04 scaffold59, whole

Gene Summary

Adenine Count

1124459 bp

Thymine Count

1131864 bp

Guanine Count

1927888 bp

Cytosine Count

1911986 bp

Genome Length

6101351 bp

Protein-coding Genes

5162 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypc/hybg/hupf family hydrogenase formation chaperoneD1Y85_10385Not AvailableNegative2354831 - 235513911001.2
hyad/hybd family hydrogenase maturation endopeptidaseD1Y85_10390Not AvailableNegative2355139 - 235576822814.1
ni/fe-hydrogenase, b-type cytochrome subunitD1Y85_10395Not AvailableNegative2355784 - 235651227645.1
nickel-dependent hydrogenase large subunitD1Y85_10400Not AvailableNegative2356528 - 235831866416.8
twin-arginine translocation signal domain-containing proteinD1Y85_10405Not AvailableNegative2358315 - 235943340624.5
hoxn/hupn/nixa family nickel/cobalt transporterD1Y85_10410Not AvailableNegative2359665 - 236074739351.8
fad-binding proteinD1Y85_10415Not AvailableNegative2361023 - 23613019467.44
erythrose-4-phosphate dehydrogenaseD1Y85_10420Not AvailablePositive2361498 - 236255038571.9
duf2252 domain-containing proteinD1Y85_10425Not AvailablePositive2363017 - 236443852589.5
fad-dependent oxidoreductaseD1Y85_10430Not AvailableNegative2364709 - 236631957926.9

Displaying genes 2061 – 2070 of 5226 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.