Rhizobium sophoriradicis strain CCBAU 03470

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium sophoriradicis strain CCBAU 03470 is characterized as a rod-shaped bacterium, which indicates its morphology. This strain possesses flagella, which suggests it has the capability for motility, potentially aiding in its environmental interactions and colonization of host plants. Genomic analysis reveals that Rhizobium sophoriradicis strain CCBAU 03470 has a single replicon, indicating a streamlined genomic structure that may contribute to its efficiency in nitrogen fixation. This trait is significant, as Rhizobium species are known for their symbiotic relationships with legumes, facilitating the conversion of atmospheric nitrogen into a form usable by plants, thereby enhancing soil fertility. The strain is cataloged under the accession number RQIH00000000.1, which provides a reference for its genomic information and facilitates further research into its genetic makeup and potential applications. Biologically, Rhizobium sophoriradicis strain CCBAU 03470 plays a crucial role in sustainable agriculture by promoting plant growth through nitrogen fixation. Its motility may enhance its ability to establish symbiotic relationships with specific legume hosts, contributing to improved soil health and crop yields in agricultural ecosystems. This highlights the ecological importance of such microorganisms in nutrient cycling and agricultural sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sophoriradicis
Strainstrain CCBAU 03470

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium sophoriradicis strain CCBAU 03470
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium sophoriradicis strain CCBAU 03470 Scaffold68_1, whole

Gene Summary

Adenine Count

1293348 bp

Thymine Count

1287356 bp

Guanine Count

2033944 bp

Cytosine Count

2051532 bp

Genome Length

6671331 bp

Protein-coding Genes

6119 genes

Non-Coding Genes

98 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf1150 family proteinEFR00_22030Not AvailableNegative4539581 - 45398389435.23
heat-shock protein hsp20EFR00_22035Not AvailableNegative4539886 - 454031115633.9
nucleoside hydrolaseEFR00_22040Not AvailablePositive4540605 - 454154934502.9
nucleotide exchange factor grpeEFR00_22045Not AvailableNegative4541589 - 454222122867.8
heat-inducible transcriptional repressor hrcaEFR00_22050Not AvailableNegative4542399 - 454348739556.5
ribonuclease phEFR00_22055Not AvailablePositive4543614 - 454433325961.1
glyoxalase/bleomycin resistance/extradiol dioxygenase family proteinEFR00_22060Not AvailablePositive4544330 - 454475515404.4
rdgb/ham1 family non-canonical purine ntp pyrophosphataseEFR00_22065Not AvailablePositive4544756 - 454540023015.0
coproporphyrinogen iii oxidaseEFR00_22070Not AvailablePositive4545410 - 454661244729.0
l-lysine dehydrogenaseEFR00_22075Not AvailableNegative4546742 - 454785440208.9

Displaying genes 4301 – 4310 of 6217 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.