Alteromonas sediminis strain U0105

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadaceae

Genus

Alteromonas

Description

Alteromonas sediminis strain U0105 is a marine bacterium notable for its motility, as indicated by the presence of flagella. This feature allows the organism to navigate its aquatic environment, potentially enhancing its ability to locate nutrients and adapt to various ecological niches within marine sediments. The strain possesses a single replicon, which simplifies its genetic organization. This characteristic can influence the bacterium's replication and overall genomic stability, contributing to its adaptability in the marine ecosystem. The accession number for Alteromonas sediminis strain U0105 is RPOK00000000.1, which provides a reference for researchers seeking to access its genomic data. Such information can be crucial for studies focused on microbial diversity, biogeochemical cycling, and the functional roles of marine bacteria. In summary, the motility provided by flagella and the streamlined genomic structure of Alteromonas sediminis strain U0105 suggest that this bacterium plays a significant role in marine sediment ecosystems, where its movement and genetic efficiency may contribute to nutrient cycling and interactions with other microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyAlteromonadaceae
GenusAlteromonas
SpeciesAlteromonas sediminis
Strainstrain U0105

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Alteromonas sediminis strain U0105
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alteromonas sediminis strain U0105 scaffold14, whole genome

Gene Summary

Adenine Count

1086228 bp

Thymine Count

1083013 bp

Guanine Count

901050 bp

Cytosine Count

893779 bp

Genome Length

3965066 bp

Protein-coding Genes

3562 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flagellar hook-length control protein flikDRW07_02370Not AvailableNegative516389 - 51842573641.9
cytochrome c biogenesis heme-transporting atpase ccmaDRW07_02375Not AvailablePositive518499 - 51912823004.0
heme exporter protein ccmbDRW07_02380Not AvailablePositive519158 - 51980223147.9
heme abc transporter permeaseDRW07_02385Not AvailablePositive519802 - 52054528189.1
heme exporter protein ccmdDRW07_02390Not AvailablePositive520547 - 5207477334.05
cytochrome c maturation protein ccmeDRW07_02395Not AvailablePositive520744 - 52120816842.5
heme lyase ccmf/nrfe family subunitDRW07_02400Not AvailablePositive521212 - 52321273611.0
thiol:disulfide interchange proteinDRW07_02405Not AvailablePositive523209 - 52380222318.1
cytochrome c-type biogenesis protein ccmhDRW07_02410Not AvailablePositive523799 - 52427518041.7
c-type cytochrome biogenesis protein ccmiDRW07_02415Not AvailablePositive524281 - 52551344247.1

Displaying genes 471 – 480 of 3615 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.