Alteromonas sediminis strain U0105

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadaceae

Genus

Alteromonas

Description

Alteromonas sediminis strain U0105 is a marine bacterium notable for its motility, as indicated by the presence of flagella. This feature allows the organism to navigate its aquatic environment, potentially enhancing its ability to locate nutrients and adapt to various ecological niches within marine sediments. The strain possesses a single replicon, which simplifies its genetic organization. This characteristic can influence the bacterium's replication and overall genomic stability, contributing to its adaptability in the marine ecosystem. The accession number for Alteromonas sediminis strain U0105 is RPOK00000000.1, which provides a reference for researchers seeking to access its genomic data. Such information can be crucial for studies focused on microbial diversity, biogeochemical cycling, and the functional roles of marine bacteria. In summary, the motility provided by flagella and the streamlined genomic structure of Alteromonas sediminis strain U0105 suggest that this bacterium plays a significant role in marine sediment ecosystems, where its movement and genetic efficiency may contribute to nutrient cycling and interactions with other microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyAlteromonadaceae
GenusAlteromonas
SpeciesAlteromonas sediminis
Strainstrain U0105

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Alteromonas sediminis strain U0105
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alteromonas sediminis strain U0105 scaffold14, whole genome

Gene Summary

Adenine Count

1086228 bp

Thymine Count

1083013 bp

Guanine Count

901050 bp

Cytosine Count

893779 bp

Genome Length

3965066 bp

Protein-coding Genes

3562 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s rrna (cytosine(1402)-n(4))-methyltransferase rsmhDRW07_00555Not AvailablePositive117109 - 11806234606.6
cell division protein ftslDRW07_00560Not AvailablePositive118059 - 11837912403.3
peptidoglycan glycosyltransferase ftsiDRW07_00565Not AvailablePositive118380 - 12011063321.1
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseDRW07_00570Not AvailablePositive120111 - 12164656183.6
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseDRW07_00575Not AvailablePositive121643 - 12304950333.5
phospho-n-acetylmuramoyl-pentapeptide- transferaseDRW07_00580Not AvailablePositive123043 - 12412539697.7
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligaseDRW07_00585Not AvailablePositive124129 - 12549649090.1
cell division protein ftswDRW07_00590Not AvailablePositive125493 - 12668343518.5
undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferaseDRW07_00595Not AvailablePositive126676 - 12774337792.1
udp-n-acetylmuramate--l-alanine ligaseDRW07_00600Not AvailablePositive127776 - 12916750644.2

Displaying genes 111 – 120 of 3615 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.